Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BD1G04220
(Brachypodium distachyon)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | BD1G04220 | 1 |  |
| Anchor point | BD1G53867 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BD1G04220 | 1 | ||
| Tree-based ortholog | BD1G04220 BD1G53867 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT1G70490 AT1G10630 AT1G23490 ... | 4 | |
| Tree-based ortholog | many-to-many | AT3G22950 AT4G02080 AT3G62560 ... | 24 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00932G00030 | 1 | |
| Tree-based ortholog | many-to-many | CP00186G00010 CP00044G01350 CP00048G01440 ... | 14 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR02G14310 CR12G02660 | 2 | |
| Tree-based ortholog | many-to-many | CR02G14310 CR12G02660 CR12G04810 ... | 15 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV61991G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV61991G00020 | 1 | ||
| Tree-based ortholog | many-to-1 | HV61991G00020 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA02G11790 | 1 | |
| Tree-based ortholog | many-to-1 | MA05G07970 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_03G57080 | 1 | |
| Anchor point | 1-to-many | OSINDICA_03G57080 OSINDICA_07G10650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G57080 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_01G15520 OSINDICA_03G57080 OSINDICA_07G10650 ... | 4 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS07G12170 OS03G59740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G16030 | 1 | ||
| Tree-based ortholog | many-to-many | OS07G12200 OS07G12170 OS01G16030 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02820 | 1 | |
| Tree-based ortholog | many-to-many | OL12G02820 OL20G02610 OL14G01290 ... | 8 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00070G00500 PP00201G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00067G00950 PP00070G00490 PP00070G00500 ... | 5 | ||
| Tree-based ortholog | many-to-many | PP00201G00210 PP00070G00490 PP00070G00520 ... | 32 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G00560 PT05G00730 | 2 | |
| Tree-based ortholog | many-to-many | PT08G10000 PT10G15260 PT15G14260 ... | 36 | ||
| Setaria italica | Anchor point | 1-to-1 | SI009G03830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G03830 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G08200 SI009G03830 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G005190 | 1 | |
| Tree-based ortholog | many-to-many | SL12G099080 SL04G025560 SL01G008000 ... | 23 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB01G003770 | 1 | |
| Anchor point | 1-to-1 | SB01G003770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G003770 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G006540 SB01G003770 SB03G010350 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G10020 | 1 | |
| Tree-based ortholog | many-to-many | VV07G09730 VV01G11410 VV05G05710 ... | 18 | ||
| Zea mays | Anchor point | 1-to-many | ZM07G04870 ZM05G01870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G01870 | 1 | ||
| Tree-based ortholog | many-to-many | ZM05G01870 ZM07G04870 | 2 |