Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATCG00470
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | ATCG00470 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | ATCG00470 | 1 | ||
| Tree-based ortholog | ATCG00470 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | N/A | BDCG00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BDCG00460 | 1 | ||
| Tree-based ortholog | 1-to-many | BDCG00460 BD5G05674 | 2 | ||
| Carica papaya | Anchor point | N/A | CPCG00480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CPCG00480 | 1 | ||
| Tree-based ortholog | 1-to-1 | CPCG00480 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRCG00400 | 1 | |
| Tree-based ortholog | 1-to-1 | CRCG00400 | 1 | ||
| Hordeum vulgare | Anchor point | N/A | HVCG00470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVCG00470 | 1 | ||
| Tree-based ortholog | 1-to-many | HVCG00470 HV1489381G00010 | 2 | ||
| Musa acuminata | Anchor point | N/A | MACG00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MACG00460 | 1 | ||
| Tree-based ortholog | 1-to-1 | MACG00460 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_CG00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_CG00220 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_CG00220 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OSCG00520 OS10G21264 OS06G39756 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS01G58000 OSCG00520 OS10G21264 | 3 | ||
| Tree-based ortholog | 1-to-many | OS01G58000 OSCG00520 OS06G39756 ... | 5 | ||
| Physcomitrella patens | Anchor point | N/A | PPCG00380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPCG00380 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPCG00380 | 1 | ||
| Populus trichocarpa | Anchor point | N/A | PTCG00490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PTCG00490 | 1 | ||
| Tree-based ortholog | 1-to-many | PT07G05460 PT07G02110 PTCG00490 ... | 4 | ||
| Setaria italica | Anchor point | N/A | SICG00480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SICG00480 | 1 | ||
| Tree-based ortholog | 1-to-1 | SICG00480 | 1 | ||
| Solanum lycopersicum | Anchor point | N/A | SL01G017220 SLCG00470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SLCG00470 | 1 | ||
| Tree-based ortholog | 1-to-many | SLCG00470 SL01G017220 | 2 | ||
| Sorghum bicolor | Anchor point | N/A | SBCG00550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SBCG00550 | 1 | ||
| Tree-based ortholog | 1-to-1 | SBCG00550 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VVCG00510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VVCG00510 | 1 | ||
| Tree-based ortholog | 1-to-1 | VVCG00510 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G36090 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM08G08230 | 1 |