Integrative Orthology Viewer: AT5G65420 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G10440 AT5G65420 | 2 | |
Anchor point | AT5G10440 AT2G22490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G10440 AT5G65420 | 2 | ||
Tree-based ortholog | AT5G65420 AT5G10440 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Anchor point | many-to-many | BD3G58300 BD3G38417 BD4G32556 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G58300 | 1 | ||
Tree-based ortholog | many-to-many | BD3G38417 BD4G32556 BD3G58300 | 3 | ||
Carica papaya | Anchor point | many-to-1 | CP00055G00360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00309G00080 | 1 | ||
Tree-based ortholog | many-to-1 | CP00055G00360 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR06G11100 CR09G11330 CR11G02450 ... | 4 | |
Tree-based ortholog | many-to-many | CR06G09980 CR11G02450 CR09G11330 | 3 | ||
Hordeum vulgare | Orthologous gene family | many-to-1 | HV37233G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV37233G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV52689G00010 HV37233G00010 | 2 | ||
Musa acuminata | Anchor point | many-to-many | MA10G25530 MA06G10520 MA07G13200 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G19490 MA03G06820 MA05G23540 ... | 12 | ||
Tree-based ortholog | many-to-many | MA10G31020 MA05G23540 MA06G02240 ... | 14 | ||
Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_09G23310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G23310 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_08G35650 OSINDICA_09G23310 OSINDICA_06G10870 | 3 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS06G11410 OS09G29100 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G29100 | 1 | ||
Tree-based ortholog | many-to-many | OS08G37390 OS09G29100 OS06G11410 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL17G01620 | 1 | |
Tree-based ortholog | many-to-many | OL17G01620 OL01G06150 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00359G00110 PP00024G00880 | 2 | |
Tree-based ortholog | many-to-many | PP00024G00880 PP00359G00110 | 2 | ||
Populus trichocarpa | Anchor point | many-to-many | PT05G15780 PT02G10350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G10350 PT05G15780 | 2 | ||
Tree-based ortholog | many-to-many | PT02G10350 PT05G15780 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI001G34080 | 1 | |
Anchor point | many-to-many | SI002G24250 SI004G08770 SI001G34080 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G34080 | 1 | ||
Tree-based ortholog | many-to-many | SI006G18490 SI002G24250 SI004G08770 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G051410 | 1 | |
Anchor point | many-to-many | SL12G087900 SL04G076040 SL11G010460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL11G010460 SL05G051410 | 2 | ||
Tree-based ortholog | many-to-many | SL05G051410 SL11G010460 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-1 | SB04G033870 | 1 | |
Anchor point | many-to-1 | SB02G027020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G033870 | 1 | ||
Tree-based ortholog | many-to-many | SB07G023350 SB02G027020 SB10G007450 ... | 4 | ||
Vitis vinifera | Anchor point | many-to-many | VV18G04300 VV00G06850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G06850 | 1 | ||
Tree-based ortholog | many-to-1 | VV00G06850 | 1 | ||
Zea mays | Anchor point | many-to-many | ZM07G16590 ZM04G27270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G16590 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G35510 ZM10G25140 ZM08G23320 ... | 7 |