Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G57550
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G57550 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT5G57560 AT5G57550 AT4G25810 | 3 | ||
| Tree-based ortholog | AT5G57550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | 1-to-1 | BD1G33840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G33840 | 1 | ||
| Tree-based ortholog | 1-to-many | BD1G33810 BD1G33840 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00233G00220 CP00233G00230 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00233G00190 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV2564927G00010 HV46448G00010 HV1569474G00010 | 3 | |
| Tree-based ortholog | 1-to-many | HV1580799G00010 HV46448G00010 HV1569474G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G31660 MA10G31650 | 2 | |
| Tree-based ortholog | 1-to-many | MA06G31660 MA10G23950 MA10G31650 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G44250 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_06G44210 OSINDICA_06G44250 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G48200 | 1 | |
| Tree-based ortholog | 1-to-many | OS06G48160 OS06G48200 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00309G00230 PP00168G00050 PP00168G00160 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00005G00910 PP00074G00080 PP00309G00230 ... | 34 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT18G09480 PT13G00570 | 2 | |
| Tree-based ortholog | 1-to-1 | PT05G00720 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G25370 | 1 | |
| Tree-based ortholog | 1-to-many | SI004G25410 SI004G25370 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G093120 SL03G093110 SL03G093130 ... | 4 | |
| Tree-based ortholog | 1-to-1 | SL07G006860 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB10G028580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G028580 | 1 | ||
| Tree-based ortholog | 1-to-many | SB10G028550 SB10G028580 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G08690 | 1 | |
| Tree-based ortholog | 1-to-many | VV11G08810 VV11G08680 VV11G08650 ... | 8 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G14340 | 1 | |
| Tree-based ortholog | 1-to-many | ZM08G08660 ZM05G14320 ZM05G14340 | 3 |