Integrative Orthology Viewer: AT5G56870 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G45130 AT2G28470 AT2G32810 ... | 9 | |
Anchor point | AT4G26140 AT3G13750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G56870 AT4G26140 AT3G52840 | 3 | ||
Tree-based ortholog | AT4G26140 AT5G56870 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G74050 BD2G24670 BD2G40450 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G41830 | 1 | ||
Tree-based ortholog | many-to-many | BD1G37450 BD3G08180 BD2G41830 | 3 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00024G00230 CP00025G00590 CP00028G00010 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00093G00260 | 1 | ||
Tree-based ortholog | many-to-1 | CP00093G00260 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV244240G00010 HV2547454G00010 HV368851G00010 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV157543G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV157543G00010 HV1572493G00010 HV244266G00010 | 3 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA01G27550 MA02G17150 MA02G22370 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G09200 MA06G00880 MA07G09170 ... | 6 | ||
Tree-based ortholog | many-to-many | MA07G09170 MA07G09180 MA07G09190 ... | 8 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G62100 OSINDICA_02G11790 OSINDICA_06G38170 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G33240 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G11790 OSINDICA_06G33240 OSINDICA_01G37160 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G39830 OS02G12730 OS03G06940 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G39830 | 1 | ||
Tree-based ortholog | many-to-many | OS02G12730 OS06G37560 OS01G39830 | 3 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00770 PP00189G00400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00010G00770 PP00189G00400 | 2 | ||
Tree-based ortholog | many-to-many | PP00010G00770 PP00189G00400 PP00149G00960 ... | 6 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04060 PT01G02570 PT01G02580 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G14450 | 1 | ||
Tree-based ortholog | many-to-1 | PT06G14450 | 1 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G03510 SI003G31090 SI004G24120 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G26520 | 1 | ||
Tree-based ortholog | many-to-1 | SI003G23670 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G110000 SL04G080840 SL10G055470 ... | 6 | |
Anchor point | many-to-many | SL12G008840 SL06G062580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G008840 | 1 | ||
Tree-based ortholog | many-to-1 | SL12G008840 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G040750 SB02G031260 SB03G025990 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G022620 | 1 | ||
Tree-based ortholog | many-to-many | SB04G007660 SB10G022620 SB03G025990 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G01310 VV06G05220 VV11G02200 ... | 5 | |
Anchor point | many-to-1 | VV11G03590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G03590 | 1 | ||
Tree-based ortholog | many-to-1 | VV11G03590 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G36930 ZM02G34330 ZM03G25370 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM09G12650 ZM04G12360 | 2 | ||
Tree-based ortholog | many-to-many | ZM04G37460 ZM09G12650 ZM04G12360 ... | 4 |