Integrative Orthology Viewer: AT5G56300 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G56300 | 1 | |
Anchor point | AT4G26420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G56300 | 1 | ||
Tree-based ortholog | AT5G56300 AT4G26420 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G44620 | 1 | |
Tree-based ortholog | many-to-many | BD1G44620 BD4G08320 BD1G42760 ... | 12 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G01650 | 1 | |
Tree-based ortholog | many-to-many | CP00099G00400 CP00099G00410 CP00006G01590 ... | 20 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV134705G00010 | 1 | |
Tree-based ortholog | many-to-many | HV135927G00010 HV1559702G00010 HV134705G00010 ... | 8 | ||
Musa acuminata | Anchor point | 1-to-1 | MA10G32320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA03G03690 | 1 | ||
Tree-based ortholog | many-to-1 | MA03G03690 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G49220 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_00G17430 OSINDICA_06G13040 OSINDICA_06G12840 ... | 30 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G57080 | 1 | |
Tree-based ortholog | many-to-many | OS05G01140 OS06G13560 OS06G13550 ... | 37 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00204G00160 PP00327G00170 | 2 | |
Tree-based ortholog | many-to-many | PP00072G01110 PP00047G00110 | 2 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G35900 | 1 | |
Tree-based ortholog | many-to-many | PT05G04590 PT05G23010 PT07G02130 ... | 29 | ||
Setaria italica | Anchor point | 1-to-1 | SI001G31000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G29220 | 1 | ||
Tree-based ortholog | many-to-many | SI003G11550 SI004G10790 SI004G10800 ... | 16 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL12G014500 SL07G064990 | 2 | |
Tree-based ortholog | many-to-many | SL04G080660 SL09G091540 SL09G091550 ... | 19 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SB02G003810 SB02G033280 SB02G003820 | 3 | |
Tree-based ortholog | many-to-many | SB09G000290 SB03G008780 SB03G008800 ... | 19 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV06G08010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G08010 | 1 | ||
Tree-based ortholog | many-to-1 | VV06G08010 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G31790 ZM04G31770 ZM04G31780 | 3 | |
Tree-based ortholog | many-to-many | ZM06G05880 ZM09G00370 ZM09G00380 ... | 15 |