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Integrative Orthology Viewer:
AT5G56160
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G19650 AT1G75370 AT5G56160 | 3 |  |
| Anchor point | AT1G55690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G56160 | 1 | ||
| Tree-based ortholog | AT1G55690 AT5G56160 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD2G47560 | 1 | |
| Anchor point | 1-to-1 | BD3G56617 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G56617 | 1 | ||
| Tree-based ortholog | many-to-1 | BD3G22400 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00012G00780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G00780 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00012G00780 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G09670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR10G05730 CR02G11750 CR12G09670 | 3 | ||
| Tree-based ortholog | many-to-many | CR02G11750 CR10G05730 CR12G09670 ... | 6 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV157489G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37791G00010 | 1 | ||
| Tree-based ortholog | many-to-many | HV300633G00010 HV131798G00010 | 2 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA03G04170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G04340 MA08G25080 MA03G04170 | 3 | ||
| Tree-based ortholog | many-to-many | MA03G04170 MA05G04340 MA08G25080 ... | 4 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G47830 OSINDICA_02G22680 | 2 | |
| Anchor point | 1-to-many | OSINDICA_08G37210 OSINDICA_09G24530 OSINDICA_02G47240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_08G23580 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_08G23580 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G04030 OS10G03400 | 2 | |
| Anchor point | 1-to-many | OS02G48990 OS09G30330 OS08G38850 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G48990 | 1 | ||
| Tree-based ortholog | many-to-1 | OS08G25310 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G00720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00720 | 1 | ||
| Tree-based ortholog | many-to-1 | OL05G01120 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00420 PP00088G00360 PP00307G00110 | 3 | |
| Tree-based ortholog | many-to-many | PP00169G00420 PP00307G00110 PP00088G00360 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G03260 PT05G23050 | 2 | |
| Anchor point | 1-to-many | PT01G47130 PT11G16830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G47130 PT11G16830 | 2 | ||
| Tree-based ortholog | many-to-many | PT01G47130 PT11G16830 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI005G10820 | 1 | |
| Anchor point | 1-to-1 | SI006G19570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI001G31240 | 1 | ||
| Tree-based ortholog | many-to-1 | SI006G11760 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G040280 | 1 | |
| Anchor point | 1-to-many | SL10G005740 SL07G066090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G066090 | 1 | ||
| Tree-based ortholog | many-to-many | SL07G066090 SL10G005740 | 2 | ||
| Sorghum bicolor | Anchor point | 1-to-many | SB07G028560 SB04G029580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G045510 | 1 | ||
| Tree-based ortholog | many-to-1 | SB01G045510 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV03G02830 VV04G01590 | 2 | |
| Anchor point | 1-to-1 | VV19G06220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G06220 | 1 | ||
| Tree-based ortholog | many-to-1 | VV19G06220 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G41010 ZM06G30070 ZM08G26210 | 3 | |
| Anchor point | 1-to-1 | ZM05G38860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G38860 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM04G12010 | 1 |