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Integrative Orthology Viewer:
AT5G54430
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G27320 AT5G54430 | 2 |  |
| Anchor point | AT4G27320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G27320 AT5G54430 | 2 | ||
| Tree-based ortholog | AT5G54430 AT4G27320 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | 1-to-1 | BD2G51890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G25170 | 1 | ||
| Tree-based ortholog | many-to-many | BD2G20680 BD2G51890 BD1G25170 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G00130 | 1 | |
| Tree-based ortholog | many-to-1 | CP00012G00130 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR12G16810 CR16G01750 | 2 | |
| Tree-based ortholog | many-to-many | CR12G16810 CR16G01750 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV276303G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV50844G00010 HV51074G00020 HV245777G00020 ... | 4 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA06G19670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G26750 MA05G27000 | 2 | ||
| Tree-based ortholog | many-to-many | MA09G25190 MA10G07900 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G54470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G29090 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_05G37930 OSINDICA_01G54470 OSINDICA_07G29090 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G57450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G36600 | 1 | ||
| Tree-based ortholog | many-to-many | OS05G42230 OS01G57450 OS07G36600 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00098G01150 PP00007G02290 PP00171G00550 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00007G02290 PP00098G01150 PP00171G00550 | 3 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT11G12550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT00G02190 PT01G40910 PT01G41480 ... | 4 | ||
| Tree-based ortholog | many-to-many | PT01G40910 PT01G41480 PT11G12550 ... | 4 | ||
| Setaria italica | Anchor point | 1-to-1 | SI005G34930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G19110 | 1 | ||
| Tree-based ortholog | many-to-many | SI003G19110 SI005G34930 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL10G006760 SL07G063680 SL07G053200 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G006760 | 1 | ||
| Tree-based ortholog | many-to-many | SL10G006760 SL07G063680 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G024745 | 1 | |
| Tree-based ortholog | many-to-many | SB09G024745 SB03G036580 SB02G035950 | 3 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV12G00320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G07230 | 1 | ||
| Tree-based ortholog | many-to-1 | VV00G07230 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM03G30120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM07G23910 ZM02G36910 | 2 | ||
| Tree-based ortholog | many-to-many | ZM06G27760 ZM05G04550 ZM03G30120 ... | 6 |