Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G54040
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT1G55380 AT5G55780 AT3G21210 ... | 99 |  |
| Tree-based ortholog | AT5G54030 AT5G54040 | 2 | ||
| Orthologous gene family | AT5G54040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00012G00460 CP00012G00420 CP00012G00470 ... | 7 | |
| Tree-based ortholog | many-to-many | CP00012G00450 CP00681G00010 CP00012G00470 ... | 7 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G20550 | 1 | |
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G28700 | 1 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G42030 | 1 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT00G04140 PT16G04480 PT00G04130 ... | 12 | |
| Tree-based ortholog | many-to-many | PT16G04460 PT16G04470 PT00G04130 ... | 13 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G26280 | 1 | |
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G073840 SL01G073860 SL08G014370 ... | 4 | |
| Tree-based ortholog | many-to-many | SL02G068680 SL08G014370 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G09810 | 1 | |
| Tree-based ortholog | many-to-1 | VV06G06850 | 1 |