Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G53130
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT5G53130 | 1 |  |
| Tree-based ortholog | AT5G53130 | 1 | ||
| Orthologous gene family | AT1G15990 AT4G01010 AT5G53130 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G09550 | 1 | |
| Tree-based ortholog | 1-to-many | BD3G09550 BD1G38680 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00620 | 1 | |
| Tree-based ortholog | 1-to-1 | CP35659G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G06730 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV46231G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV159915G00010 HV46231G00010 HV2582504G00010 | 3 | ||
| Orthologous gene family | many-to-1 | HV159915G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA06G23130 | 1 | |
| Tree-based ortholog | 1-to-many | MA05G24950 MA06G14650 MA06G23130 | 3 | ||
| Orthologous gene family | many-to-many | MA04G29580 MA07G16460 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G14660 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_02G51700 OSINDICA_02G14660 OSINDICA_06G29490 ... | 4 | ||
| Orthologous gene family | many-to-1 | OSINDICA_04G47170 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G33570 | 1 | |
| Tree-based ortholog | 1-to-many | OS06G33600 OS02G15580 OS06G33610 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00037G00790 PP00068G00620 PP00211G00370 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00149G00350 PP00211G00370 PP00037G00790 ... | 5 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G00220 PT15G01910 | 2 | |
| Tree-based ortholog | 1-to-many | PT15G01910 PT12G00220 | 2 | ||
| Orthologous gene family | many-to-many | PT12G00220 PT15G01910 | 2 | ||
| Anchor point | N/A | PT15G01910 PT12G00220 PT14G09790 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI001G01530 | 1 | |
| Tree-based ortholog | 1-to-many | SI001G01540 SI001G01530 SI004G17080 ... | 4 | ||
| Anchor point | N/A | SI001G01530 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G051920 | 1 | |
| Tree-based ortholog | 1-to-many | SL06G051920 SL03G007260 | 2 | ||
| Orthologous gene family | many-to-1 | SL08G069140 | 1 | ||
| Anchor point | N/A | SL01G095770 SL03G007250 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G009250 | 1 | |
| Tree-based ortholog | 1-to-many | SB04G009240 SB04G009250 SB10G020550 | 3 | ||
| Anchor point | N/A | SB04G009240 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G06790 | 1 | |
| Tree-based ortholog | 1-to-1 | VV16G06790 | 1 | ||
| Anchor point | N/A | VV16G06790 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G36440 | 1 | |
| Tree-based ortholog | 1-to-many | ZM04G36450 ZM04G36470 ZM06G15190 ... | 6 | ||
| Anchor point | N/A | ZM04G36440 | 1 |