Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G29000
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G29000 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT3G04450 AT5G29000 | 2 | ||
| Tree-based ortholog | AT5G29000 AT3G04450 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G63530 | 1 | |
| Tree-based ortholog | many-to-many | BD3G55120 BD1G28920 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP02085G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP02085G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G01210 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G01210 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV136418G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV136418G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G31090 MA02G10360 MA05G13290 ... | 4 | |
| Tree-based ortholog | many-to-many | MA02G10360 MA04G31090 MA08G13000 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G19710 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_07G19710 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G21240 | 1 | |
| Tree-based ortholog | many-to-many | OS07G25710 OS03G21240 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G02830 | 1 | |
| Tree-based ortholog | many-to-1 | OL12G02830 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00226G00160 PP00269G00210 PP00068G01350 | 3 | |
| Tree-based ortholog | many-to-many | PP00083G00510 PP00024G00740 PP00073G00500 ... | 19 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G25780 PT19G02090 PT13G04800 | 3 | |
| Tree-based ortholog | many-to-many | PT19G02090 PT02G25780 PT13G04800 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G42920 | 1 | |
| Tree-based ortholog | many-to-1 | SI002G11820 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL09G072830 SL06G008200 | 2 | |
| Tree-based ortholog | many-to-1 | SL06G008200 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G024090 | 1 | |
| Tree-based ortholog | many-to-1 | SB04G036955 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G11490 | 1 | |
| Tree-based ortholog | many-to-many | VV07G11490 VV08G09450 VV14G05070 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G14330 | 1 | |
| Tree-based ortholog | many-to-many | ZM05G43980 ZM07G07450 | 2 |