Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G27840
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G05580 AT5G27840 | 2 |  |
| Anchor point | AT3G05580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G27840 AT3G05580 | 2 | ||
| Tree-based ortholog | AT3G05580 AT5G27840 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD2G35150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G12650 | 1 | ||
| Tree-based ortholog | many-to-many | BD2G12650 BD2G35150 BD2G35130 | 3 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00048G01000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G01000 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00048G01000 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G11640 | 1 | |
| Tree-based ortholog | many-to-many | CR03G14780 CR09G05840 CR06G15180 ... | 8 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV92181G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV92181G00010 | 1 | ||
| Tree-based ortholog | many-to-many | HV1577239G00010 HV92181G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA11G26220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G26220 MA02G02280 | 2 | ||
| Tree-based ortholog | many-to-many | MA11G26220 MA08G06800 MA11G14310 ... | 4 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_01G23700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G06390 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_01G23700 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G24750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G24750 | 1 | ||
| Tree-based ortholog | many-to-1 | OS01G24750 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL14G00360 | 1 | |
| Tree-based ortholog | many-to-many | OL07G01850 OL17G01170 OL02G04880 ... | 7 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00283G00270 PP00039G00450 PP00022G01060 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00088G00890 PP00081G01020 PP00088G00880 ... | 19 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT05G02410 PT13G01470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G01470 PT05G02410 | 2 | ||
| Tree-based ortholog | many-to-many | PT05G02410 PT13G01470 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G16280 | 1 | |
| Tree-based ortholog | many-to-many | SI005G16280 SI007G27410 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G099860 | 1 | |
| Anchor point | 1-to-1 | SL01G099860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G099860 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G099860 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G013800 | 1 | |
| Tree-based ortholog | many-to-many | SB03G013800 SB09G004260 | 2 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G09120 | 1 | |
| Anchor point | 1-to-1 | VV14G09120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G09120 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G09120 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G07750 | 1 | |
| Tree-based ortholog | many-to-many | ZM08G07750 ZM06G19490 ZM08G12500 | 3 |