Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G16340
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT1G75960 AT5G16340 AT5G16370 | 3 |  |
| Tree-based ortholog | AT5G16340 AT5G16370 | 2 | ||
| Orthologous gene family | AT5G16340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G26000 | 1 | |
| Tree-based ortholog | many-to-1 | BD5G26000 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00108G00150 | 1 | |
| Tree-based ortholog | many-to-1 | CP00064G01520 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G15830 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G15830 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV160558G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV52908G00010 HV160558G00010 HV60549G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA02G11260 | 1 | |
| Tree-based ortholog | many-to-many | MA02G03820 MA01G07240 MA01G07220 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G30580 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_04G50000 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G57850 | 1 | |
| Tree-based ortholog | many-to-1 | OS04G57850 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G00160 | 1 | |
| Tree-based ortholog | many-to-many | OL01G06260 OL10G01670 OL04G05140 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00220G00210 | 1 | |
| Tree-based ortholog | many-to-1 | PP00007G01680 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G09620 PT13G09410 PT19G06810 ... | 6 | |
| Tree-based ortholog | many-to-many | PT13G09620 PT13G09410 PT13G09570 ... | 7 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G01770 | 1 | |
| Tree-based ortholog | many-to-many | SI003G01770 SI003G01830 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G031940 | 1 | |
| Tree-based ortholog | many-to-many | SL03G031940 SL02G037490 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G009610 | 1 | |
| Tree-based ortholog | many-to-many | SB10G009610 SB06G032750 SB10G009600 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV04G06800 VV04G06830 | 2 | |
| Tree-based ortholog | many-to-many | VV04G06830 VV04G06800 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G17410 | 1 | |
| Tree-based ortholog | many-to-many | ZM06G17410 ZM02G00630 ZM02G24890 | 3 |