Integrative Orthology Viewer: AT5G01840 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G01840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | AT5G01840 | 1 | ||
Tree-based ortholog | AT1G06920 AT2G30400 AT5G58360 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Anchor point | N/A | BD1G63120 BD2G22310 BD2G53610 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G28000 | 1 | ||
Tree-based ortholog | many-to-many | BD2G19720 BD2G49880 | 2 | ||
Carica papaya | Anchor point | N/A | CP00086G00340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00086G00340 | 1 | ||
Tree-based ortholog | many-to-1 | CP00086G00340 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV47415G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV1558296G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G30470 MA03G10010 MA00G12570 ... | 4 | |
Tree-based ortholog | many-to-1 | MA03G10010 | 1 | ||
Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_05G35770 OSINDICA_01G57490 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_05G23000 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_01G51510 OSINDICA_05G39310 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | N/A | OS07G48150 OS01G60810 OS05G39950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G25910 | 1 | ||
Tree-based ortholog | many-to-many | OS01G54570 OS05G44090 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G00820 PP00065G00200 PP00369G00120 ... | 6 | |
Tree-based ortholog | many-to-many | PP00028G00250 PP00007G01480 PP00034G01810 ... | 6 | ||
Populus trichocarpa | Anchor point | N/A | PT16G13420 PT19G12850 PT06G10770 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G13420 PT13G15520 PT19G12850 ... | 4 | ||
Tree-based ortholog | many-to-many | PT13G15520 PT19G12850 | 2 | ||
Setaria italica | Anchor point | N/A | SI003G20790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G29200 | 1 | ||
Tree-based ortholog | many-to-many | SI003G18130 SI005G32580 | 2 | ||
Solanum lycopersicum | Anchor point | N/A | SL10G076180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G076180 | 1 | ||
Tree-based ortholog | many-to-1 | SL06G082460 | 1 | ||
Sorghum bicolor | Anchor point | N/A | SB03G038320 SB01G036070 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G012740 | 1 | ||
Tree-based ortholog | many-to-many | SB09G025650 SB03G034650 | 2 | ||
Vitis vinifera | Anchor point | N/A | VV08G06000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G06000 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G06000 | 1 | ||
Zea mays | Anchor point | N/A | ZM03G28270 ZM01G14740 ZM06G26610 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G13680 | 1 | ||
Tree-based ortholog | many-to-many | ZM06G28610 ZM03G31930 | 2 |