Integrative Orthology Viewer: AT4G15415 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G09880 AT3G26020 AT4G15415 ... | 5 | |
Anchor point | AT3G21650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G15415 AT3G21650 | 2 | ||
Tree-based ortholog | AT3G21650 AT4G15415 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G01930 BD1G12470 BD2G17210 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G14090 | 1 | ||
Tree-based ortholog | many-to-many | BD5G13810 BD3G14090 BD1G01930 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00053G01520 CP00092G01010 CP00132G00070 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00132G00070 | 1 | ||
Tree-based ortholog | many-to-1 | CP00132G00070 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G01450 | 1 | |
Tree-based ortholog | many-to-1 | CR13G01450 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV159072G00010 HV49169G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV45777G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV159072G00010 HV45777G00010 HV49169G00010 | 3 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA02G08490 MA05G26070 MA07G07560 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G32800 MA05G26070 | 2 | ||
Tree-based ortholog | many-to-1 | MA09G19580 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G02070 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_04G32710 OSINDICA_08G02070 OSINDICA_03G59810 ... | 4 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G08310 | 1 | |
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G04280 | 1 | |
Tree-based ortholog | many-to-1 | OL07G04280 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00034G01480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00171G00440 PP00081G00420 PP00084G01270 ... | 7 | ||
Tree-based ortholog | many-to-many | PP00171G00440 PP00084G01270 PP00098G01140 ... | 8 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G14850 PT02G22620 PT08G17990 ... | 5 | |
Anchor point | 1-to-1 | PT14G15700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G22620 PT14G15700 | 2 | ||
Tree-based ortholog | many-to-many | PT14G15700 PT02G22620 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI002G10130 SI009G13990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G07850 | 1 | ||
Tree-based ortholog | many-to-many | SI007G14900 SI006G07850 SI009G01370 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G093800 SL05G014340 SL06G065690 ... | 6 | |
Anchor point | 1-to-1 | SL07G049220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G093800 SL02G067980 | 2 | ||
Tree-based ortholog | many-to-1 | SL07G049220 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G001550 SB03G031350 SB06G020625 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G002150 | 1 | ||
Tree-based ortholog | many-to-many | SB06G020625 SB07G002150 SB01G001550 ... | 4 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G03580 VV11G05740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G11250 | 1 | ||
Tree-based ortholog | many-to-1 | VV12G11250 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G47580 ZM02G11990 ZM03G03240 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G01360 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G11990 ZM10G19040 ZM04G08310 ... | 7 |