Integrative Orthology Viewer: AT4G04900 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT4G04900 | 1 | |
Anchor point | AT1G61795 AT4G21745 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G21745 AT4G04900 | 2 | ||
Tree-based ortholog | AT4G04900 AT4G21745 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G15340 | 1 | |
Tree-based ortholog | many-to-many | BD3G54830 BD3G04770 BD1G32850 ... | 5 | ||
Carica papaya | Anchor point | many-to-1 | CP00198G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00380G00020 | 1 | ||
Tree-based ortholog | many-to-many | CP00198G00170 CP00165G00290 CP00380G00020 | 3 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV229787G00010 | 1 | |
Tree-based ortholog | many-to-many | HV229787G00010 HV138439G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G15280 MA07G03440 | 2 | |
Tree-based ortholog | many-to-many | MA11G15280 MA07G03440 MA01G05860 ... | 5 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G61860 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_04G45750 OSINDICA_02G54750 OSINDICA_02G06310 ... | 4 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G53580 | 1 | |
Tree-based ortholog | many-to-many | OS02G56580 OS02G06660 OS06G46754 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00046G00340 | 1 | |
Tree-based ortholog | many-to-1 | PP00046G00340 | 1 | ||
Populus trichocarpa | Anchor point | many-to-1 | PT04G02070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT11G02530 | 1 | ||
Tree-based ortholog | many-to-many | PT11G02530 PT04G02070 PT02G03550 ... | 6 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G03950 | 1 | |
Tree-based ortholog | many-to-many | SI001G08110 SI004G26710 SI007G25450 ... | 4 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL02G080230 SL03G031770 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G080230 SL10G005340 | 2 | ||
Tree-based ortholog | many-to-many | SL02G080230 SL10G005340 SL03G031770 ... | 6 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G005150 | 1 | |
Tree-based ortholog | many-to-many | SB04G036650 SB04G004320 SB06G029330 ... | 4 | ||
Vitis vinifera | Anchor point | many-to-1 | VV10G00400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV10G00400 | 1 | ||
Tree-based ortholog | many-to-1 | VV10G00400 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G07600 | 1 | |
Tree-based ortholog | many-to-many | ZM02G03540 ZM02G03640 ZM05G43740 ... | 11 |