Integrative Orthology Viewer: AT4G01060 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT4G01060 | 1 | |
Anchor point | AT1G01380 AT5G53200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G01060 | 1 | ||
Tree-based ortholog | AT4G01060 AT1G01380 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD4G23967 | 1 | |
Carica papaya | Anchor point | many-to-1 | CP00003G00560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00560 | 1 | ||
Tree-based ortholog | many-to-1 | CP29502G00010 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV55329G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV55329G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA08G20400 MA00G20450 | 2 | |
Tree-based ortholog | many-to-many | MA09G11840 MA10G09380 MA01G05260 ... | 4 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G41290 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_01G41240 OSINDICA_01G41290 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS01G43180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G43180 | 1 | ||
Tree-based ortholog | many-to-1 | OS01G43180 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00006G01980 | 1 | |
Populus trichocarpa | Anchor point | many-to-many | PT02G16890 PT14G09630 PT15G02200 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G09630 PT02G16890 | 2 | ||
Tree-based ortholog | many-to-many | PT07G12280 PT11G02630 PT04G02130 ... | 5 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G38070 | 1 | |
Solanum lycopersicum | Anchor point | many-to-1 | SL01G095640 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G095640 | 1 | ||
Tree-based ortholog | many-to-many | SL12G005800 SL07G052490 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G028170 | 1 | |
Tree-based ortholog | many-to-1 | SB03G028170 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV15G06130 VV16G06820 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G06820 | 1 | ||
Tree-based ortholog | many-to-many | VV10G01030 VV12G12270 VV10G00340 | 3 | ||
Zea mays | Anchor point | many-to-1 | ZM03G37390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G37390 | 1 | ||
Tree-based ortholog | many-to-many | ZM03G37390 ZM02G25610 | 2 |