Integrative Orthology Viewer: AT3G57330 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G57330 AT4G37640 AT5G53010 | 3 | |
Anchor point | AT2G41560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G57330 AT2G41560 | 2 | ||
Tree-based ortholog | AT2G41560 AT3G57330 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G14630 BD1G70920 BD4G43300 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G43300 | 1 | ||
Tree-based ortholog | many-to-many | BD4G43300 BD2G60324 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00044G01310 CP00052G01210 CP00067G00080 ... | 5 | |
Anchor point | 1-to-1 | CP00182G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00182G00100 | 1 | ||
Tree-based ortholog | many-to-1 | CP00197G00190 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR16G08980 CR12G04490 CR09G04230 ... | 4 | |
Tree-based ortholog | many-to-many | CR16G08980 CR02G12370 CR12G04490 ... | 5 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV159041G00010 HV46008G00010 HV6937G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV138554G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV159041G00010 HV138554G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G05160 MA07G26260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G30850 MA04G11320 | 2 | ||
Tree-based ortholog | many-to-many | MA05G08290 MA09G18190 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G07780 OSINDICA_03G09110 OSINDICA_11G02840 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_11G02840 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_12G03320 OSINDICA_11G02840 OSINDICA_01G67620 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G10640 OS05G41580 OS12G39660 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G04220 | 1 | ||
Tree-based ortholog | many-to-many | OS12G04220 OS11G04460 OS01G71240 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G01960 | 1 | |
Tree-based ortholog | many-to-1 | OL09G01960 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00037G01670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00037G01670 | 1 | ||
Tree-based ortholog | many-to-1 | PP00037G01670 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02060 PT02G04750 PT08G15910 ... | 7 | |
Anchor point | 1-to-many | PT06G04650 PT16G04300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G04650 PT16G04310 | 2 | ||
Tree-based ortholog | many-to-many | PT06G04650 PT16G04310 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI003G19540 SI005G45930 SI006G19990 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI007G32330 SI008G02440 | 2 | ||
Tree-based ortholog | many-to-many | SI007G32330 SI008G02440 SI005G45930 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G064680 SL02G092450 SL09G082870 | 3 | |
Anchor point | 1-to-1 | SL10G079300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G079300 SL04G016260 | 2 | ||
Tree-based ortholog | many-to-many | SL04G016260 SL10G079300 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB04G005130 SB07G028160 SB08G001260 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB05G002380 | 1 | ||
Tree-based ortholog | many-to-many | SB05G002380 SB08G001260 SB03G045370 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G04920 VV08G07070 VV14G03190 ... | 4 | |
Anchor point | 1-to-1 | VV08G07070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G07070 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G07070 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G07010 ZM01G31650 ZM08G28020 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G29350 | 1 | ||
Tree-based ortholog | many-to-many | ZM10G00390 ZM04G29350 ZM03G21470 ... | 4 |