Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G56660
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G40950 AT3G56660 | 2 |  |
| Anchor point | AT2G40950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G56660 AT2G40950 | 2 | ||
| Tree-based ortholog | AT3G56660 AT2G40950 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G25400 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G25400 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00092G00680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00092G00680 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00092G00680 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2661413G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV2661413G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G25960 MA10G01450 MA03G25620 | 3 | |
| Tree-based ortholog | many-to-many | MA11G25960 MA03G25620 MA10G01450 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G30420 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_05G30420 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G34050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G34050 | 1 | ||
| Tree-based ortholog | many-to-1 | OS05G34050 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL03G02770 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00025G01680 PP00158G00510 | 2 | |
| Tree-based ortholog | many-to-many | PP00158G00510 PP00025G01680 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT16G03240 PT06G03450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G03450 PT16G03240 | 2 | ||
| Tree-based ortholog | many-to-many | PT16G03240 PT06G03450 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI003G24610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G24610 | 1 | ||
| Tree-based ortholog | many-to-1 | SI003G24610 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL10G078290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G056460 SL10G078290 | 2 | ||
| Tree-based ortholog | many-to-many | SL04G056460 SL10G078290 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G020320 | 1 | |
| Tree-based ortholog | many-to-1 | SB09G020320 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G03710 | 1 | ||
| Tree-based ortholog | many-to-1 | VV08G03710 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G24220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G24220 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM06G24220 | 1 |