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Integrative Orthology Viewer:
AT3G55550
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G70110 AT2G37710 AT2G43690 ... | 18 |  |
| Anchor point | AT2G29220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G55550 | 1 | ||
| Tree-based ortholog | AT3G55550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G23697 BD1G23710 BD1G23730 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G38317 | 1 | ||
| Tree-based ortholog | 1-to-many | BD1G57780 BD5G16600 BD1G57775 ... | 11 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00001G04260 CP00228G00020 | 2 | |
| Anchor point | 1-to-1 | CP00001G04260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G04260 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00001G04260 CP00228G00020 | 2 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HV138141G00010 HV138863G00010 HV1570075G00010 ... | 16 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1560612G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | HV1570075G00010 HV138141G00010 HV92670G00010 ... | 16 | ||
| Musa acuminata | Anchor point | 1-to-many | MA07G10890 MA09G03520 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G00480 MA09G03520 | 2 | ||
| Tree-based ortholog | 1-to-many | MA09G03520 MA08G02600 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G18430 OSINDICA_02G18500 OSINDICA_04G37040 ... | 18 | |
| Anchor point | 1-to-1 | OSINDICA_03G58000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_12G26560 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_12G26560 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G19530 OS02G42780 OS03G56160 ... | 21 | |
| Anchor point | 1-to-1 | OS03G60810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G38610 | 1 | ||
| Tree-based ortholog | 1-to-many | OS07G15940 OS07G04130 OS07G04040 ... | 20 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00116G00920 | 1 | |
| Tree-based ortholog | 1-to-many | PP00061G00240 PP00293G00340 PP00056G00280 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04700 PT00G04720 PT00G04770 ... | 7 | |
| Anchor point | 1-to-many | PT10G20060 PT06G08840 PT08G05840 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G05840 PT10G20060 | 2 | ||
| Tree-based ortholog | 1-to-1 | PT16G10100 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-many | SI001G13940 SI001G17620 SI001G26090 ... | 15 | |
| Anchor point | 1-to-1 | SI009G03010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G33340 | 1 | ||
| Tree-based ortholog | 1-to-many | SI007G33800 SI001G12970 SI003G07970 ... | 15 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G011060 SL09G011070 | 2 | |
| Anchor point | 1-to-many | SL09G011060 SL10G084860 SL05G053010 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053010 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL09G011070 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | SB01G003020 SB01G006780 SB01G020960 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB08G019050 | 1 | ||
| Tree-based ortholog | 1-to-many | SB08G000750 SB02G002210 SB06G023510 ... | 15 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV13G04960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04960 | 1 | ||
| Tree-based ortholog | 1-to-many | VV08G06750 VV06G03140 | 2 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G10190 ZM01G27190 ZM01G43690 ... | 14 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G27190 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM01G27190 | 1 |