Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G55370
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT3G55370 | 1 |  |
| Tree-based ortholog | AT3G55370 AT2G28810 | 2 | ||
| Orthologous gene family | AT3G55370 | 1 | ||
| Anchor point | AT5G02460 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G37130 | 1 | |
| Tree-based ortholog | many-to-many | BD1G66597 BD2G62380 BD2G37130 ... | 5 | ||
| Anchor point | 1-to-1 | BD2G62380 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00361G00030 | 1 | |
| Tree-based ortholog | many-to-1 | CP00361G00030 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08220 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G08220 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1576039G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV157123G00010 HV66209G00010 HV1576039G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA11G25150 MA06G35050 MA10G03720 ... | 4 | |
| Tree-based ortholog | many-to-many | MA05G29930 MA08G02670 MA10G03720 ... | 5 | ||
| Anchor point | 1-to-many | MA06G35050 MA10G03720 MA09G03380 ... | 4 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_00G33740 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_03G57850 OSINDICA_00G33740 OSINDICA_05G01070 | 3 | ||
| Anchor point | 1-to-1 | OSINDICA_03G57850 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G13260 | 1 | |
| Tree-based ortholog | many-to-many | OS03G60630 OS07G13260 OS05G02150 ... | 4 | ||
| Anchor point | 1-to-1 | OS03G60630 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G02810 | 1 | |
| Tree-based ortholog | many-to-1 | OL08G01590 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00170G00130 PP00012G01770 | 2 | |
| Tree-based ortholog | many-to-many | PP00170G00130 PP00012G01770 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G20480 PT10G20540 PT08G05510 | 3 | |
| Tree-based ortholog | many-to-1 | PT10G20540 | 1 | ||
| Anchor point | 1-to-many | PT08G05510 PT01G23840 PT10G20480 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G06440 | 1 | |
| Tree-based ortholog | many-to-many | SI003G06440 SI003G33650 SI009G03240 | 3 | ||
| Anchor point | 1-to-1 | SI009G03240 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL06G076030 SL11G066050 | 2 | |
| Tree-based ortholog | many-to-1 | SL10G086440 | 1 | ||
| Anchor point | 1-to-many | SL05G054510 SL09G010680 SL06G076030 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G039550 | 1 | |
| Tree-based ortholog | many-to-many | SB08G018760 SB01G003210 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV13G05260 VV08G14710 | 2 | |
| Tree-based ortholog | many-to-1 | VV06G03780 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G57870 | 1 | |
| Tree-based ortholog | many-to-many | ZM05G01500 ZM08G21420 ZM05G01510 ... | 8 | ||
| Anchor point | 1-to-1 | ZM01G11350 | 1 |