Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G54540
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G54540 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT3G54540 | 1 | ||
| Tree-based ortholog | AT3G54540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G15780 | 1 | |
| Tree-based ortholog | 1-to-many | BD1G15780 BD2G42170 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00103G00710 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00103G00710 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G07620 | 1 | |
| Tree-based ortholog | 1-to-1 | CR01G07620 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV49104G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV49104G00010 HV38719G00020 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA09G30740 | 1 | |
| Tree-based ortholog | 1-to-1 | MA09G30740 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G31330 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_03G31330 OSINDICA_04G48400 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G32630 | 1 | |
| Tree-based ortholog | 1-to-many | OS03G32630 OS04G56330 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G03260 | 1 | |
| Tree-based ortholog | 1-to-1 | OL14G03260 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00086G00690 PP00119G00620 | 2 | |
| Tree-based ortholog | 1-to-many | PP00119G00620 PP00086G00690 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G25440 PT08G00330 | 2 | |
| Tree-based ortholog | 1-to-many | PT08G00330 PT10G25440 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G35050 | 1 | |
| Tree-based ortholog | 1-to-many | SI009G35050 SI007G26840 SI002G02260 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL10G012190 SL07G008610 | 2 | |
| Tree-based ortholog | 1-to-many | SL10G012190 SL07G008610 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G004540 | 1 | |
| Tree-based ortholog | 1-to-1 | SB02G004540 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G16720 | 1 | |
| Tree-based ortholog | 1-to-many | VV18G16720 VV18G00550 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G03090 | 1 | |
| Tree-based ortholog | 1-to-many | ZM07G03090 ZM02G46330 | 2 |