Integrative Orthology Viewer: AT3G50070 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G50070 | 1 | |
Anchor point | AT5G67260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G67260 AT3G50070 | 2 | ||
Tree-based ortholog | AT3G50070 AT5G67260 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G58300 | 1 | |
Tree-based ortholog | many-to-1 | BD4G08357 | 1 | ||
Carica papaya | Anchor point | 1-to-many | CP00142G00200 CP00055G00920 CP00021G01480 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00055G00920 | 1 | ||
Tree-based ortholog | many-to-1 | CP00055G00920 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR06G11100 CR11G02450 CR06G09980 | 3 | |
Tree-based ortholog | many-to-many | CR06G09980 CR11G02450 CR09G11330 | 3 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV94758G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV8931G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G19490 MA03G06820 MA05G23540 ... | 11 | |
Tree-based ortholog | many-to-many | MA02G05390 MA00G01220 MA01G10100 ... | 6 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G26050 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_09G00930 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G42860 | 1 | |
Tree-based ortholog | many-to-1 | OS09G02360 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G06150 | 1 | |
Tree-based ortholog | many-to-many | OL17G01620 OL01G06150 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00359G00110 PP00024G00880 | 2 | |
Tree-based ortholog | many-to-many | PP00024G00880 PP00359G00110 | 2 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT14G02300 PT05G14190 PT02G12300 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G04830 PT05G14190 | 2 | ||
Tree-based ortholog | many-to-many | PT07G04830 PT05G14190 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI009G17260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G34080 | 1 | ||
Tree-based ortholog | many-to-1 | SI002G14440 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL04G078470 SL02G092980 SL02G064860 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G107730 | 1 | ||
Tree-based ortholog | many-to-many | SL02G064900 SL02G092980 | 2 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB01G014590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G033870 | 1 | ||
Tree-based ortholog | many-to-1 | SB02G014250 | 1 | ||
Vitis vinifera | Anchor point | 1-to-many | VV07G00950 VV18G06660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV07G00950 VV03G00650 | 2 | ||
Tree-based ortholog | many-to-many | VV18G06660 VV03G00650 VV07G00950 | 3 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G27460 | 1 | |
Tree-based ortholog | many-to-many | ZM07G08630 ZM02G27170 | 2 |