Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G28415
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT3G28360 AT3G28345 AT3G28415 ... | 5 |  |
| Tree-based ortholog | AT3G28415 AT3G28345 | 2 | ||
| Orthologous gene family | AT3G28415 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G06577 | 1 | |
| Tree-based ortholog | many-to-many | BD5G13617 BD5G09380 | 2 | ||
| Orthologous gene family | 1-to-1 | BD5G13617 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00014G00710 | 1 | |
| Tree-based ortholog | many-to-1 | CP00005G00070 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR17G06430 CR17G06420 | 2 | |
| Tree-based ortholog | many-to-1 | CR13G07370 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV244018G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV244018G00010 | 1 | ||
| Orthologous gene family | 1-to-1 | HV138091G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G19070 | 1 | |
| Tree-based ortholog | many-to-1 | MA01G19070 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G09130 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_02G09130 OSINDICA_02G09100 | 2 | ||
| Orthologous gene family | 1-to-1 | OSINDICA_02G09100 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G09720 | 1 | |
| Tree-based ortholog | many-to-1 | OS02G09720 | 1 | ||
| Orthologous gene family | 1-to-1 | OS04G40570 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04730 | 1 | |
| Tree-based ortholog | many-to-1 | OL13G00780 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00338G00060 | 1 | |
| Tree-based ortholog | many-to-many | PP00121G00040 PP00014G01490 PP00209G00570 ... | 5 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G07400 PT17G08500 | 2 | |
| Tree-based ortholog | many-to-1 | PT17G07400 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G20090 | 1 | |
| Tree-based ortholog | many-to-1 | SI001G20090 | 1 | ||
| Orthologous gene family | 1-to-many | SI005G30860 SI007G14620 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G087410 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G087410 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G006100 | 1 | |
| Tree-based ortholog | many-to-many | SB04G006090 SB04G006100 | 2 | ||
| Orthologous gene family | 1-to-1 | SB04G006090 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G12540 | 1 | |
| Tree-based ortholog | many-to-1 | VV19G10090 | 1 | ||
| Orthologous gene family | 1-to-1 | VV19G05190 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G30440 | 1 | |
| Tree-based ortholog | many-to-many | ZM10G18960 ZM02G15960 | 2 | ||
| Orthologous gene family | 1-to-1 | ZM10G18960 | 1 |