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Integrative Orthology Viewer:
AT3G13460
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G55500 AT3G13460 | 2 |  |
| Anchor point | AT1G55500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G13460 AT1G55500 | 2 | ||
| Tree-based ortholog | AT3G13460 AT1G55500 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G74560 | 1 | |
| Tree-based ortholog | many-to-many | BD1G05970 BD4G02150 BD1G74560 | 3 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00119G00300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00119G00300 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00119G00300 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G07220 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV6537G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV54876G00010 HV6537G00010 HV2549503G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G22000 MA07G01540 MA05G02950 ... | 5 | |
| Tree-based ortholog | many-to-many | MA04G23290 MA04G29260 MA07G01540 ... | 6 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G05380 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_07G05840 OSINDICA_03G51630 OSINDICA_03G05380 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G53670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G53670 | 1 | ||
| Tree-based ortholog | many-to-many | OS07G07490 OS03G53670 OS03G06240 | 3 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00181G00260 PP00198G00880 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00181G00260 PP00198G00880 | 2 | ||
| Tree-based ortholog | many-to-many | PP00198G00880 PP00181G00260 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT03G22270 PT01G00200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT03G22270 PT01G00200 | 2 | ||
| Tree-based ortholog | many-to-many | PT01G00200 PT03G22270 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI009G54990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G54990 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G04460 SI009G05730 SI009G09130 ... | 4 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G028860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G028860 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G028860 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G008170 | 1 | |
| Tree-based ortholog | many-to-many | SB02G003990 SB01G005500 SB01G008170 | 3 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV06G07860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G07860 | 1 | ||
| Tree-based ortholog | many-to-1 | VV06G07860 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G04120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G04120 | 1 | ||
| Tree-based ortholog | many-to-many | ZM07G02600 ZM02G46500 ZM08G11040 ... | 6 |