Integrative Orthology Viewer: AT3G11400 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G11400 | 1 | |
Anchor point | AT5G06000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G11400 | 1 | ||
Tree-based ortholog | AT3G11400 AT5G06000 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G53710 | 1 | |
Tree-based ortholog | many-to-1 | BD3G53710 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G02600 | 1 | |
Tree-based ortholog | many-to-many | CP00019G02600 CP00119G00200 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G04670 | 1 | |
Tree-based ortholog | many-to-1 | CR06G04670 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV49014G00010 | 1 | |
Musa acuminata | Orthologous gene family | 1-to-1 | MA10G23020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA10G23020 | 1 | ||
Tree-based ortholog | many-to-many | MA10G23020 MA08G21230 MA10G02380 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_02G52940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G52940 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G52940 OSINDICA_02G52930 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G54700 | 1 | |
Tree-based ortholog | many-to-many | OS02G54700 OS02G54690 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL06G04000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G04000 | 1 | ||
Tree-based ortholog | many-to-1 | OL06G04000 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00078G00130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00078G00130 PP00271G00390 | 2 | ||
Tree-based ortholog | many-to-many | PP00078G00130 PP00271G00390 | 2 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19900 PT08G06000 | 2 | |
Tree-based ortholog | many-to-many | PT08G06000 PT10G19900 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI004G03200 | 1 | |
Tree-based ortholog | many-to-many | SI004G03200 SI007G20740 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL03G096680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G096680 | 1 | ||
Tree-based ortholog | many-to-many | SL08G074840 SL08G074860 SL08G074790 ... | 4 | ||
Sorghum bicolor | Orthologous gene family | 1-to-1 | SB07G001980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G001980 | 1 | ||
Tree-based ortholog | many-to-many | SB07G001980 SB04G035420 SB06G025590 | 3 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV06G02810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV06G02810 VV13G04700 | 2 | ||
Tree-based ortholog | many-to-many | VV06G02810 VV13G04700 | 2 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM04G08440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G08440 | 1 | ||
Tree-based ortholog | many-to-many | ZM04G08440 ZM05G42810 | 2 |