Integrative Orthology Viewer: AT3G09220 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G09220 | 1 | |
Anchor point | AT5G01040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G09220 | 1 | ||
Tree-based ortholog | AT5G01050 AT5G01040 AT3G09220 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD4G39330 | 1 | |
Tree-based ortholog | many-to-many | BD4G11770 BD4G11780 BD1G10567 ... | 14 | ||
Carica papaya | Anchor point | 1-to-many | CP00019G02140 CP00056G00660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00660 | 1 | ||
Tree-based ortholog | many-to-1 | CP00056G00660 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06860 | 1 | |
Tree-based ortholog | many-to-many | CR01G06860 CR03G04690 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV138544G00010 | 1 | |
Tree-based ortholog | many-to-many | HV46035G00010 HV54387G00010 HV192781G00010 ... | 9 | ||
Musa acuminata | Anchor point | 1-to-1 | MA09G03810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA06G34730 MA06G34740 | 2 | ||
Tree-based ortholog | many-to-many | MA06G34740 MA06G34730 | 2 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G59810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_12G11860 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_03G05140 OSINDICA_06G04860 OSINDICA_06G04890 ... | 12 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS11G48060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G15920 | 1 | ||
Tree-based ortholog | many-to-many | OS11G16260 OS11G42220 OS11G42200 ... | 10 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00077G00890 | 1 | |
Tree-based ortholog | many-to-many | PP00077G00890 PP00206G00320 | 2 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT06G09410 PT16G11200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G09410 PT16G10610 PT16G10750 ... | 6 | ||
Tree-based ortholog | many-to-many | PT16G10750 PT16G10600 PT16G10610 ... | 6 | ||
Setaria italica | Anchor point | 1-to-1 | SI008G01760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G30530 | 1 | ||
Tree-based ortholog | many-to-many | SI008G21800 SI008G21790 SI007G11980 ... | 34 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL09G011960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G043360 | 1 | ||
Tree-based ortholog | many-to-1 | SL05G043360 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB08G011530 | 1 | |
Tree-based ortholog | many-to-many | SB05G025570 SB03G009410 SB05G026630 ... | 8 | ||
Vitis vinifera | Anchor point | 1-to-many | VV08G13250 VV08G13570 VV08G14370 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13570 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G13570 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G00120 | 1 | |
Tree-based ortholog | many-to-many | ZM03G08070 ZM04G01500 ZM04G00680 ... | 9 |