Integrative Orthology Viewer: AT2G41240 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G41240 | 1 | |
Anchor point | AT3G56970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G41240 AT3G56970 AT3G56980 | 3 | ||
Tree-based ortholog | AT2G41240 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Anchor point | 1-to-1 | BD2G60970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD2G61050 BD2G60970 | 2 | ||
Tree-based ortholog | 1-to-many | BD3G43250 BD2G60970 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00005G01720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G01730 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV61367G00010 | 1 | |
Tree-based ortholog | 1-to-many | HV2546648G00010 HV50068G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G22710 MA00G15430 | 2 | |
Tree-based ortholog | 1-to-many | MA08G22710 MA00G15430 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G68770 | 1 | |
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G72370 | 1 | |
Tree-based ortholog | 1-to-1 | OS01G72370 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00231G00080 PP00107G00940 PP00001G01120 | 3 | |
Populus trichocarpa | Anchor point | 1-to-1 | PT16G03730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G03760 PT16G03730 | 2 | ||
Tree-based ortholog | 1-to-many | PT06G03720 PT06G03760 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G46810 | 1 | |
Solanum lycopersicum | Anchor point | 1-to-1 | SL10G079650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G079660 SL10G079650 | 2 | ||
Tree-based ortholog | 1-to-many | SL10G079650 SL10G079660 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV08G10160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV08G10160 VV13G06610 | 2 | ||
Tree-based ortholog | 1-to-1 | VV13G06610 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G20670 | 1 | |
Tree-based ortholog | 1-to-1 | ZM08G27700 | 1 |