Integrative Orthology Viewer: AT2G40540 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G60160 AT1G70300 AT2G40540 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | AT2G40540 | 1 | ||
Tree-based ortholog | AT2G40540 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G26560 BD1G43780 BD1G59730 ... | 15 | |
Anchor point | N/A | BD1G63100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G63100 | 1 | ||
Tree-based ortholog | 1-to-many | BD1G63100 BD1G17830 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G03620 CP00069G00090 CP00875G00030 | 3 | |
Anchor point | N/A | CP00019G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP26967G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00019G00830 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR04G00340 CR17G04030 CR17G04020 ... | 4 | |
Tree-based ortholog | 1-to-many | CR17G04020 CR17G04030 CR17G04090 ... | 5 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV136558G00010 HV1561359G00010 HV1561819G00010 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV136558G00010 | 1 | ||
Tree-based ortholog | 1-to-many | HV136558G00010 HV66114G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA03G24130 MA05G00220 MA07G12720 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA08G01810 MA11G25660 | 2 | ||
Tree-based ortholog | 1-to-many | MA11G25660 MA08G01810 MA07G22650 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G67290 OSINDICA_02G30140 OSINDICA_02G47990 ... | 12 | |
Anchor point | N/A | OSINDICA_03G20990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G20990 | 1 | ||
Tree-based ortholog | 1-to-many | OSINDICA_03G20990 OSINDICA_07G40060 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G70940 OS02G31910 OS02G31940 ... | 8 | |
Anchor point | N/A | OS07G48130 OS03G21890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G21890 | 1 | ||
Tree-based ortholog | 1-to-many | OS03G21890 OS07G48130 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00134G00600 PP00166G00210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00165G00700 | 1 | ||
Tree-based ortholog | 1-to-many | PP00488G00070 PP00033G01540 PP00251G00170 ... | 10 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04650 PT00G04670 PT01G06980 ... | 11 | |
Anchor point | N/A | PT19G05650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G05650 PT13G08340 | 2 | ||
Tree-based ortholog | 1-to-many | PT13G08340 PT19G05650 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G18590 SI002G13000 SI002G33530 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI002G44190 | 1 | ||
Tree-based ortholog | 1-to-many | SI009G42470 SI002G44190 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G105150 SL02G087000 SL05G005740 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G050170 | 1 | ||
Tree-based ortholog | 1-to-1 | SL06G050170 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G015990 SB01G036050 SB02G026170 ... | 12 | |
Anchor point | N/A | SB01G036050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G036050 | 1 | ||
Tree-based ortholog | 1-to-many | SB01G036050 SB02G042930 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G21080 VV02G03910 VV07G03490 ... | 4 | |
Anchor point | N/A | VV13G09470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G09470 | 1 | ||
Tree-based ortholog | 1-to-1 | VV13G09470 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G45230 ZM03G22040 ZM04G10860 ... | 7 | |
Anchor point | N/A | ZM01G14780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G14780 | 1 | ||
Tree-based ortholog | 1-to-many | ZM01G14780 ZM07G30070 | 2 |