Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G30260
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G06960 AT2G30260 | 2 |  |
| Anchor point | AT1G06960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G06960 AT2G30260 | 2 | ||
| Tree-based ortholog | AT1G06960 AT2G30260 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD1G65000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G65000 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G65000 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00002G03180 | 1 | |
| Anchor point | 1-to-1 | CP00002G03180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00002G03180 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00002G03180 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G01180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G01180 | 1 | ||
| Tree-based ortholog | many-to-1 | CR13G01180 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV42519G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV2550112G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA03G10100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G01860 MA03G10100 | 2 | ||
| Tree-based ortholog | many-to-1 | MA11G14320 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_03G17520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G17520 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_05G05150 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G18720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G18720 | 1 | ||
| Tree-based ortholog | many-to-1 | OS03G18720 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G04780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G04780 | 1 | ||
| Tree-based ortholog | many-to-1 | OL02G04780 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00087G00420 | 1 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT19G12140 PT19G12330 | 2 | |
| Anchor point | 1-to-1 | PT13G15370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT19G12140 PT19G12330 PT13G15370 | 3 | ||
| Tree-based ortholog | many-to-many | PT19G12140 PT19G12330 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI009G44930 | 1 | |
| Anchor point | 1-to-1 | SI009G44930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G44930 | 1 | ||
| Tree-based ortholog | many-to-1 | SI009G44930 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL06G082360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G082360 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | SB01G038060 | 1 | |
| Anchor point | 1-to-1 | SB01G038060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G038060 | 1 | ||
| Tree-based ortholog | many-to-1 | SB01G038060 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV06G00880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G00880 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G12710 | 1 | |
| Anchor point | 1-to-1 | ZM09G22890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G22890 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM01G12710 | 1 |