Integrative Orthology Viewer: AT2G30210 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G29130 AT2G30210 AT5G01050 ... | 7 | |
Anchor point | AT2G40370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G30210 | 1 | ||
Tree-based ortholog | AT2G30210 AT5G07130 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G65100 BD2G53800 BD2G54690 ... | 5 | |
Anchor point | 1-to-1 | BD2G53800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G53800 | 1 | ||
Tree-based ortholog | many-to-many | BD1G65100 BD2G53800 BD4G44810 | 3 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00056G00660 CP00081G01180 CP00085G00780 | 3 | |
Anchor point | 1-to-1 | CP00002G03320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01210 | 1 | ||
Tree-based ortholog | many-to-1 | CP00002G03320 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06860 | 1 | |
Tree-based ortholog | many-to-many | CR01G06860 CR03G04690 | 2 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV1570130G00010 HV160336G00010 HV37404G00010 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1585379G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV38942G00010 HV1585379G00010 HV38997G00010 | 3 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G14000 MA03G10130 MA03G15640 ... | 12 | |
Anchor point | 1-to-1 | MA03G10130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA06G36610 MA03G10130 MA09G18350 | 3 | ||
Tree-based ortholog | many-to-many | MA03G10130 MA09G18350 MA00G14000 ... | 4 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_00G30700 OSINDICA_01G57800 OSINDICA_01G59150 ... | 8 | |
Anchor point | 1-to-many | OSINDICA_03G17400 OSINDICA_11G00180 OSINDICA_01G57800 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G57800 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_03G17400 OSINDICA_01G57800 OSINDICA_11G00180 ... | 5 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G27700 OS01G62480 OS01G62600 ... | 12 | |
Anchor point | 1-to-many | OS11G01730 OS12G01730 OS01G61160 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G61160 | 1 | ||
Tree-based ortholog | many-to-many | OS03G18640 OS01G61160 OS11G01730 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00206G00320 | 1 | |
Tree-based ortholog | many-to-many | PP00077G00890 PP00206G00320 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G20620 PT05G20050 PT05G20070 ... | 12 | |
Anchor point | 1-to-1 | PT13G15270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G12170 PT19G12430 PT13G15270 | 3 | ||
Tree-based ortholog | many-to-many | PT19G12430 PT19G12170 PT13G15270 | 3 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G22790 SI003G08520 SI003G22090 ... | 13 | |
Anchor point | 1-to-many | SI005G37400 SI009G45020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G37400 | 1 | ||
Tree-based ortholog | many-to-many | SI009G45020 SI005G37400 SI008G01760 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G072280 SL06G048860 SL06G082240 ... | 4 | |
Anchor point | 1-to-many | SL06G082240 SL06G050530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G082240 | 1 | ||
Tree-based ortholog | many-to-1 | SL06G082240 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G039690 SB03G039520 SB04G027850 ... | 7 | |
Anchor point | 1-to-many | SB03G038550 SB01G038130 SB08G000720 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G038550 | 1 | ||
Tree-based ortholog | many-to-many | SB01G038130 SB03G038550 SB08G000720 ... | 4 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G22350 VV00G22380 VV06G00980 ... | 10 | |
Anchor point | 1-to-many | VV13G09850 VV06G00980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G00980 | 1 | ||
Tree-based ortholog | many-to-1 | VV06G00980 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G11210 ZM01G48750 ZM03G26820 ... | 13 | |
Anchor point | 1-to-1 | ZM03G28090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G28090 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G12650 ZM03G28090 ZM08G32650 ... | 4 |