Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G20840
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G20840 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT2G20840 | 1 | ||
| Tree-based ortholog | AT2G20840 AT1G03550 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G20570 | 1 | |
| Tree-based ortholog | many-to-many | BD1G24610 BD2G20570 BD2G51770 | 3 | ||
| Carica papaya | Anchor point | N/A | CP00034G01120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00034G01120 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00034G01120 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G03810 | 1 | |
| Tree-based ortholog | many-to-1 | CR02G03810 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV119849G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV1574827G00010 HV119849G00010 HV1568110G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA09G03000 MA04G28460 | 2 | |
| Tree-based ortholog | many-to-many | MA02G02920 MA00G14370 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_07G30070 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_07G30070 OSINDICA_05G38000 OSINDICA_01G54250 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G37740 | 1 | |
| Tree-based ortholog | many-to-many | OS07G37740 OS05G42330 OS01G57220 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G02160 | 1 | |
| Tree-based ortholog | many-to-1 | OL16G02160 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00257G00590 PP00050G00400 PP00058G01250 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00050G00400 PP00297G00250 PP00030G01650 ... | 5 | ||
| Populus trichocarpa | Anchor point | N/A | PT13G14470 PT19G10400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G10400 PT13G14470 | 2 | ||
| Tree-based ortholog | many-to-many | PT13G14470 PT19G10400 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G34780 | 1 | |
| Tree-based ortholog | many-to-many | SI002G36280 SI003G19040 SI005G34780 | 3 | ||
| Solanum lycopersicum | Anchor point | N/A | SL10G008550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL12G010750 SL07G054490 | 2 | ||
| Tree-based ortholog | many-to-many | SL12G010750 SL07G054490 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G036500 | 1 | |
| Tree-based ortholog | many-to-many | SB02G036500 SB09G024810 SB03G036410 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV12G11910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G11910 | 1 | ||
| Tree-based ortholog | many-to-1 | VV12G11910 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G24440 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G24440 ZM06G27810 ZM08G18910 ... | 4 |