Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G17620
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT2G17620 AT4G35620 | 2 |  |
| Tree-based ortholog | AT4G35620 AT2G17620 | 2 | ||
| Orthologous gene family | AT2G17620 | 1 | ||
| Anchor point | AT1G20590 AT4G35620 AT1G76310 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G29830 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G29830 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00055G01860 CP00535G00030 | 2 | |
| Tree-based ortholog | many-to-many | CP00535G00030 CP00055G01860 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G12650 | 1 | |
| Tree-based ortholog | many-to-1 | CR08G03470 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1566824G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV58727G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G23210 MA11G23070 MA08G13750 ... | 5 | |
| Tree-based ortholog | many-to-1 | MA11G23210 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G39770 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_06G46540 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G51110 | 1 | |
| Tree-based ortholog | many-to-1 | OS06G51110 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G06270 | 1 | |
| Tree-based ortholog | many-to-1 | OL01G06270 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00271G00070 PP00089G00550 | 2 | |
| Tree-based ortholog | many-to-many | PP00271G00070 PP00089G00550 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT05G10000 | 1 | |
| Tree-based ortholog | many-to-1 | PT05G10000 | 1 | ||
| Anchor point | many-to-1 | PT05G10000 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G20540 | 1 | |
| Tree-based ortholog | many-to-1 | SI004G29550 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G032190 SL02G082820 | 2 | |
| Tree-based ortholog | many-to-many | SL02G082820 SL02G061650 SL03G032190 | 3 | ||
| Anchor point | many-to-many | SL02G061650 SL02G082820 SL12G094600 ... | 4 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G030790 | 1 | |
| Tree-based ortholog | many-to-1 | SB10G030790 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G10480 | 1 | |
| Tree-based ortholog | many-to-many | VV03G04320 VV18G10480 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G22400 ZM02G07050 | 2 | |
| Tree-based ortholog | many-to-1 | ZM06G09820 | 1 |