Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G16380
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G16380 | 1 |  |
| Anchor point | AT4G34580 AT4G39170 AT2G18180 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G34580 AT2G16380 | 2 | ||
| Tree-based ortholog | AT2G16380 AT4G34580 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G11140 | 1 | |
| Tree-based ortholog | many-to-many | BD3G11140 BD3G03030 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00106G00090 | 1 | |
| Tree-based ortholog | many-to-1 | CP00106G00090 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR10G05730 CR02G11750 CR12G09670 | 3 | |
| Tree-based ortholog | many-to-many | CR02G11750 CR10G05730 CR12G09670 ... | 6 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV244420G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV244420G00010 HV47516G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G03290 MA02G14570 MA05G24230 | 3 | |
| Tree-based ortholog | many-to-many | MA02G14570 MA06G03290 MA05G24230 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G22680 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_02G22660 OSINDICA_02G22680 OSINDICA_02G03370 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G24430 | 1 | |
| Tree-based ortholog | many-to-many | OS10G03400 OS02G24430 OS02G04030 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G00720 | 1 | |
| Tree-based ortholog | many-to-many | OL16G02610 OL05G01120 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00169G00420 PP00088G00360 PP00307G00110 | 3 | |
| Tree-based ortholog | many-to-many | PP00169G00420 PP00307G00110 PP00088G00360 ... | 6 | ||
| Populus trichocarpa | Anchor point | many-to-many | PT09G11940 PT04G15760 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT09G11940 | 1 | ||
| Tree-based ortholog | many-to-many | PT04G15760 PT09G11940 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI005G10840 SI005G10820 | 2 | |
| Tree-based ortholog | many-to-many | SI005G10840 SI005G10820 SI001G10010 | 3 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL01G109860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL11G040280 SL01G109860 SL10G053900 | 3 | ||
| Tree-based ortholog | many-to-many | SL11G040280 SL10G053900 SL01G109860 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G021100 | 1 | |
| Tree-based ortholog | many-to-many | SB04G021100 SB04G002760 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G01590 | 1 | |
| Tree-based ortholog | many-to-many | VV04G01590 VV03G02830 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G29110 | 1 | |
| Tree-based ortholog | many-to-many | ZM05G29110 ZM05G18840 | 2 |