Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G75390
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G75390 | 1 |  |
| Anchor point | AT4G34590 AT2G18160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G75390 | 1 | ||
| Tree-based ortholog | AT1G75390 AT4G34590 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | many-to-1 | BD3G02980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G22040 | 1 | ||
| Tree-based ortholog | many-to-many | BD4G27720 BD3G22040 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00006G01700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00538G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00006G01700 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G04610 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV47588G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV59155G00010 | 1 | ||
| Musa acuminata | Anchor point | many-to-1 | MA10G21170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G06580 MA03G29540 MA03G29450 ... | 4 | ||
| Tree-based ortholog | many-to-1 | MA10G21170 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_02G03300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G03300 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_00G33880 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS02G03960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G03960 | 1 | ||
| Tree-based ortholog | many-to-many | OS09G13575 OS09G13570 OS08G26880 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00069G00660 PP00158G00490 | 2 | |
| Tree-based ortholog | many-to-1 | PP00158G00490 | 1 | ||
| Populus trichocarpa | Anchor point | many-to-many | PT09G11970 PT02G03190 PT04G15820 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G03190 PT04G15820 PT09G11970 ... | 4 | ||
| Tree-based ortholog | many-to-many | PT05G23130 PT02G03190 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI006G12440 | 1 | |
| Tree-based ortholog | many-to-many | SI002G17220 SI006G12440 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G109880 | 1 | |
| Anchor point | many-to-many | SL10G054010 SL04G080740 SL01G109880 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G109880 | 1 | ||
| Tree-based ortholog | many-to-1 | SL04G080740 | 1 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB04G002700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G002700 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G020760 SB07G015450 | 2 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV03G02860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G02860 | 1 | ||
| Tree-based ortholog | many-to-1 | VV03G02860 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G18680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G18680 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM07G10870 | 1 |