Integrative Orthology Viewer: AT1G70560 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G70560 | 1 | |
Anchor point | AT1G23320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G23320 AT1G70560 | 2 | ||
Tree-based ortholog | AT1G23320 AT1G70560 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G34400 | 1 | |
Tree-based ortholog | many-to-many | BD2G34400 BD2G04290 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00069G00950 | 1 | |
Tree-based ortholog | many-to-1 | CP00069G00950 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV138536G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV138536G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G09150 MA10G21220 MA03G21300 | 3 | |
Tree-based ortholog | many-to-many | MA10G21220 MA03G21300 MA06G09150 | 3 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G06960 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_05G06250 OSINDICA_01G06960 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G07500 | 1 | |
Tree-based ortholog | many-to-many | OS05G07720 OS01G07500 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00003G00900 PP00167G00540 | 2 | |
Tree-based ortholog | many-to-many | PP00003G00900 PP00167G00540 | 2 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT12G08330 PT08G18780 PT10G04450 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G18780 PT10G04450 | 2 | ||
Tree-based ortholog | many-to-many | PT08G18780 PT10G04450 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G11910 | 1 | |
Tree-based ortholog | many-to-many | SI003G09990 SI006G07420 SI005G11910 ... | 4 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL06G071640 SL03G112460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G017610 SL05G031600 | 2 | ||
Tree-based ortholog | many-to-many | SL01G017610 SL05G031600 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G004570 | 1 | |
Tree-based ortholog | many-to-many | SB09G005070 SB03G004570 SB09G005080 | 3 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV17G01220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV00G08760 VV00G18000 | 2 | ||
Tree-based ortholog | many-to-many | VV00G18000 VV00G08760 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G03800 ZM08G04170 | 2 | |
Tree-based ortholog | many-to-many | ZM06G18790 ZM03G03800 ZM08G04170 ... | 4 |