Integrative Orthology Viewer: AT1G54960 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT1G09000 AT1G54960 | 2 | |
Tree-based ortholog | AT1G54960 AT1G09000 | 2 | ||
Orthologous gene family | AT1G54960 | 1 | ||
Anchor point | AT1G09000 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G29500 | 1 | |
Tree-based ortholog | many-to-many | BD3G36080 BD4G29500 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G00460 | 1 | |
Tree-based ortholog | many-to-many | CP00888G00020 CP00048G00460 | 2 | ||
Anchor point | 1-to-1 | CP00048G00460 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G10060 | 1 | |
Tree-based ortholog | many-to-1 | CR10G10060 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV136113G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV1645732G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G19590 MA02G05490 | 2 | |
Tree-based ortholog | many-to-many | MA02G05490 MA09G19590 | 2 | ||
Orthologous gene family | 1-to-1 | MA09G19590 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G16450 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_08G30760 OSINDICA_09G16450 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G21510 | 1 | |
Tree-based ortholog | many-to-many | OS08G32600 OS09G21510 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL13G01090 | 1 | |
Tree-based ortholog | many-to-many | OL13G01840 OL21G01140 OL02G01470 ... | 7 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00216G00140 PP00151G00030 PP00151G00020 | 3 | |
Tree-based ortholog | many-to-many | PP00151G00030 PP00151G00020 PP00216G00140 | 3 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G02270 PT05G03340 | 2 | |
Tree-based ortholog | many-to-many | PT08G14950 PT10G09200 PT13G02270 ... | 4 | ||
Anchor point | 1-to-many | PT05G03340 PT13G02270 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G19840 | 1 | |
Tree-based ortholog | many-to-many | SI002G19840 SI006G15010 | 2 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G098980 | 1 | |
Tree-based ortholog | many-to-1 | SL01G079750 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G023830 | 1 | |
Tree-based ortholog | many-to-many | SB02G023830 SB07G020580 | 2 | ||
Anchor point | 1-to-1 | SB04G022690 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV05G04430 VV14G00380 | 2 | |
Tree-based ortholog | many-to-many | VV05G04430 VV14G00380 | 2 | ||
Anchor point | 1-to-1 | VV14G00380 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G30130 | 1 | |
Tree-based ortholog | many-to-many | ZM07G13200 ZM02G30130 ZM04G13540 | 3 |