Integrative Orthology Viewer: AT1G48900 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G15310 AT1G48900 AT5G49500 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | AT1G48900 | 1 | ||
Tree-based ortholog | AT5G49500 AT1G15310 AT1G48900 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Orthologous gene family | many-to-many | BD2G20340 BD2G51400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G20340 | 1 | ||
Tree-based ortholog | many-to-many | BD2G51400 BD2G20340 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00167G00090 | 1 | |
Tree-based ortholog | many-to-1 | CP00167G00090 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G01780 | 1 | |
Tree-based ortholog | many-to-1 | CR13G01780 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HV276502G00010 HV164370G00010 | 2 | |
Tree-based ortholog | many-to-many | HV276502G00010 HV164370G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA08G03190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA08G03190 | 1 | ||
Tree-based ortholog | many-to-many | MA08G03190 MA09G26290 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G53490 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_01G53490 OSINDICA_05G38650 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G56600 | 1 | |
Tree-based ortholog | many-to-many | OS01G56600 OS05G43390 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G00530 | 1 | |
Tree-based ortholog | many-to-many | OL01G00860 OL07G04320 OL10G00530 | 3 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00007G00410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00007G00410 | 1 | ||
Tree-based ortholog | many-to-1 | PP00007G00410 | 1 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G11280 | 1 | |
Tree-based ortholog | many-to-many | PT01G25360 PT01G25350 PT16G11280 ... | 4 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G34350 | 1 | |
Tree-based ortholog | many-to-many | SI005G34350 SI009G33030 SI003G18760 | 3 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G042740 | 1 | |
Tree-based ortholog | many-to-many | SL12G042740 SL03G116810 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-1 | SB03G036030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G036030 | 1 | ||
Tree-based ortholog | many-to-many | SB03G036030 SB09G025050 SB01G014055 ... | 5 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV09G07200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G07200 | 1 | ||
Tree-based ortholog | many-to-1 | VV09G07200 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G34090 | 1 | |
Tree-based ortholog | many-to-many | ZM08G34090 ZM03G30470 ZM06G28130 | 3 |