Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G15750
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G15750 AT3G15880 AT3G16830 | 3 |  |
| Anchor point | AT1G80490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G15750 AT1G80490 | 2 | ||
| Tree-based ortholog | AT1G80490 AT1G15750 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD1G67800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G67800 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G67800 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00010G01240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G01210 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00010G01240 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR05G03350 CR12G02830 CR01G08550 ... | 4 | |
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV42022G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV51534G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | HV51534G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA01G16070 MA04G05790 MA04G10180 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G23590 MA04G10180 MA06G37370 | 3 | ||
| Tree-based ortholog | many-to-many | MA06G37370 MA04G10180 MA06G23590 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G13330 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_03G13330 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G14980 | 1 | |
| Tree-based ortholog | many-to-1 | OS03G14980 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G00810 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00316G00160 PP00099G00800 | 2 | |
| Tree-based ortholog | many-to-many | PP00316G00160 PP00099G00800 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G06680 PT13G08130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G20050 | 1 | ||
| Tree-based ortholog | many-to-many | PT03G03000 PT01G20050 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G48040 | 1 | |
| Tree-based ortholog | many-to-1 | SI009G48040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G116750 | 1 | |
| Anchor point | 1-to-1 | SL03G117360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G117360 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G117360 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G040800 | 1 | |
| Tree-based ortholog | many-to-1 | SB01G040800 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV09G07080 VV11G06750 | 2 | |
| Anchor point | 1-to-1 | VV09G08020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV09G08020 | 1 | ||
| Tree-based ortholog | many-to-1 | VV09G08020 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G10000 ZM10G09950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G10000 | 1 | ||
| Tree-based ortholog | many-to-many | ZM09G24550 ZM01G10000 | 2 |