Integrative Orthology Viewer: AT1G15540 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G15540 | 1 | |
Anchor point | AT1G52790 AT1G80320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G15540 AT1G80320 | 2 | ||
Tree-based ortholog | AT1G15540 AT1G80320 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G35940 | 1 | |
Tree-based ortholog | many-to-many | BD2G15660 BD3G35910 BD3G35940 | 3 | ||
Carica papaya | Anchor point | many-to-1 | CP00010G01650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP02824G00010 CP00010G01650 | 2 | ||
Tree-based ortholog | many-to-many | CP00010G01650 CP00010G01700 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1581467G00010 | 1 | |
Tree-based ortholog | many-to-many | HV2561028G00010 HV2554929G00010 HV43080G00010 ... | 5 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G21190 MA05G10030 MA01G05460 ... | 5 | |
Tree-based ortholog | many-to-many | MA04G00800 MA01G05460 MA03G21190 ... | 6 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G44340 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_05G44340 OSINDICA_05G44370 OSINDICA_11G11840 ... | 6 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G32160 | 1 | |
Tree-based ortholog | many-to-many | OS05G50090 OS08G32160 OS08G32170 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL21G00380 OL13G02620 | 2 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00015G01360 PP00103G00510 PP00277G00380 ... | 6 | |
Populus trichocarpa | Anchor point | many-to-many | PT18G03340 PT06G24800 PT01G17580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G17600 | 1 | ||
Tree-based ortholog | many-to-1 | PT01G17610 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI003G13620 SI009G14860 | 2 | |
Tree-based ortholog | many-to-many | SI003G13620 SI009G14860 SI003G13630 ... | 12 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL12G042980 SL06G066830 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G067870 | 1 | ||
Tree-based ortholog | many-to-1 | SL06G067870 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G029340 | 1 | |
Tree-based ortholog | many-to-many | SB09G029340 SB10G009340 SB07G020360 ... | 6 | ||
Vitis vinifera | Anchor point | many-to-1 | VV09G05730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV09G05780 VV09G05770 | 2 | ||
Tree-based ortholog | many-to-many | VV09G05740 VV09G05790 VV09G05770 ... | 5 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G17350 ZM06G31860 | 2 | |
Tree-based ortholog | many-to-many | ZM06G31860 ZM06G17350 ZM04G13470 ... | 4 |