Functional clusters   top

Information

Type
Mapman term
Identifier
29.5.11.4.2
Description
protein.degradation.ubiquitin.E3.RING

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana317CH_ath_1629200.0000000916875
Brachypodium distachyonBd117CH_bdi_136670.00000400178
Brachypodium distachyonBd217CH_bdi_180550.0000348748
Chlamydomonas reinhardtiichromosome_1017CH_cre_41470.000103786
Oryza sativa ssp. japonica117CH_osa_339590.000138236
Oryza sativa ssp. japonica417CH_osa_421450.00077357
Setaria italicascaffold_117CH_sit_11510220.0000000027954
Setaria italicascaffold_417CH_sit_3014204.87142e-18
Setaria italicascaffold_717CH_sit_329560.0000808841
Setaria italicascaffold_118CH_sit_4610220.0000000027954
Setaria italicascaffold_418CH_sit_2614204.87142e-18
Solanum lycopersicumch0117CH_sly_181660.000000174572
Solanum lycopersicumch0917CH_sly_165790.0000000797842
Solanum lycopersicumch1117CH_sly_276550.0000134107
Vitis viniferachr717CH_vvi_340570.000127368
Zea mays517CH_zma_67660.000000163747

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V