Functional clusters   top

Information

Type
Mapman term
Identifier
27.3.99
Description
RNA.regulation of transcription.unclassified

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana117CH_ath_2058240.0000019298
Arabidopsis thaliana118CH_ath_8410800.000252506
Brachypodium distachyonBd117CH_bdi_157550.0000103154
Brachypodium distachyonBd317CH_bdi_213570.000211936
Brachypodium distachyonBd317CH_bdi_265440.000790648
Oryza sativa ssp. japonica1117CH_osa_431580.000967818
Oryza sativa ssp. japonica617CH_osa_129780.0000000222451
Populus trichocarpaChr0117CH_ptr_1668120.0000000119076
Populus trichocarpaChr0317CH_ptr_20310300.0000000934636
Populus trichocarpaChr1617CH_ptr_3669430.000120595
Populus trichocarpaChr1817CH_ptr_240670.00000111313
Populus trichocarpaChr0118CH_ptr_7910270.0000000271539
Populus trichocarpaChr0318CH_ptr_8210300.0000000934636
Populus trichocarpaChr1618CH_ptr_11610700.000783759
Setaria italicascaffold_117CH_sit_159790.000000144653
Setaria italicascaffold_417CH_sit_2209270.0000030422
Setaria italicascaffold_417CH_sit_5216470.0000000000000839854
Setaria italicascaffold_417CH_sit_3386110.000126821
Setaria italicascaffold_418CH_sit_3516470.0000000000000839854
Setaria italicascaffold_418CH_sit_6510440.0000183781
Solanum lycopersicumch0117CH_sly_1258110.00000000520013
Solanum lycopersicumch0217CH_sly_1698140.000000091367
Solanum lycopersicumch0217CH_sly_283550.0000143186
Solanum lycopersicumch0417CH_sly_116770.00000000248577
Solanum lycopersicumch0717CH_sly_341560.0000849648
Solanum lycopersicumch0717CH_sly_282550.0000143186
Solanum lycopersicumch0817CH_sly_281550.0000143186
Solanum lycopersicumch0118CH_sly_8710580.000164567
Vitis viniferachr417CH_vvi_4455110.000993103

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V