Functional clusters
Information
- Type
- Mapman term
- Identifier
- 20.2.1
- Description
- stress.abiotic.heat
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brachypodium distachyon | Bd1 | 17 | CH_bdi_81 | 7 | 13 | 0.0000000546248 |
Brachypodium distachyon | Bd1 | 18 | CH_bdi_45 | 10 | 101 | 0.000132745 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_126 | 5 | 5 | 0.0000000164495 |
Oryza sativa ssp. japonica | 11 | 17 | CH_osa_277 | 4 | 5 | 0.0000266154 |
Oryza sativa ssp. japonica | 3 | 17 | CH_osa_411 | 4 | 9 | 0.000664071 |
Populus trichocarpa | Chr07 | 17 | CH_ptr_44 | 10 | 11 | 5.98489e-17 |
Populus trichocarpa | Chr08 | 17 | CH_ptr_355 | 4 | 4 | 0.0000752438 |
Populus trichocarpa | Chr07 | 18 | CH_ptr_41 | 10 | 11 | 5.98489e-17 |
Setaria italica | scaffold_5 | 17 | CH_sit_128 | 6 | 7 | 0.00000000950542 |
Setaria italica | scaffold_8 | 17 | CH_sit_290 | 5 | 9 | 0.0000293656 |
Vitis vinifera | chr13 | 17 | CH_vvi_97 | 10 | 26 | 0.00000000000812025 |
Vitis vinifera | chr4 | 17 | CH_vvi_173 | 6 | 9 | 0.000000112494 |
Vitis vinifera | chr13 | 18 | CH_vvi_51 | 10 | 26 | 0.00000000000812025 |
Zea mays | 10 | 17 | CH_zma_139 | 5 | 9 | 0.0000641319 |
Zea mays | 3 | 17 | CH_zma_127 | 5 | 8 | 0.000028671 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |