Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR026082
Description
ABC transporter A, ABCA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana313CH_ath_21772.77433e-21
Arabidopsis thaliana513CH_ath_146460.00000000469526
Brachypodium distachyonBd313CH_bdi_157330.00000016898
Carica papayasupercontig_10713CH_cpa_286220.0000970827
Musa acuminatachr313CH_mac_17560.000000000000280997
Musa acuminatachrUn_random13CH_mac_57460.00000000331331
Musa acuminatachrUn_random15CH_mac_34220.000794849
Oryza sativa ssp. indicaChr0813CH_osaindica_351330.000000109072
Oryza sativa ssp. japonica813CH_osa_345350.00000038192
Populus trichocarpaChr1213CH_ptr_777220.000747031
Populus trichocarpaChr1513CH_ptr_776220.000747031
Setaria italicascaffold_113CH_sit_297330.000000266967
Setaria italicascaffold_613CH_sit_421370.00000933884
Solanum lycopersicumch0313CH_sly_171450.000000000594868
Solanum lycopersicumch0613CH_sly_92550.0000000000000204832
Sorghum bicolorchr_413CH_sbi_288330.000000426141
Sorghum bicolorchr_713CH_sbi_202490.00000000936138
Zea mays413CH_zma_190340.0000012746

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V