Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR024949
- Description
- Bet v I type allergen
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brachypodium distachyon | Bd1 | 13 | CH_bdi_83 | 4 | 5 | 0.000000000221922 |
Carica papaya | supercontig_9 | 13 | CH_cpa_281 | 2 | 2 | 0.0000970827 |
Musa acuminata | chr3 | 13 | CH_mac_97 | 3 | 3 | 0.0000000842403 |
Physcomitrella patens | scaffold_2 | 13 | CH_ppa_126 | 2 | 2 | 0.000396668 |
Populus trichocarpa | Chr08 | 13 | CH_ptr_56 | 8 | 11 | 1.93535e-20 |
Populus trichocarpa | Chr10 | 13 | CH_ptr_270 | 4 | 5 | 0.0000000164013 |
Setaria italica | scaffold_9 | 13 | CH_sit_248 | 3 | 3 | 0.0000000476727 |
Solanum lycopersicum | ch09 | 13 | CH_sly_142 | 4 | 4 | 0.0000000000396645 |
Sorghum bicolor | chr_1 | 13 | CH_sbi_111 | 4 | 4 | 0.00000000000295043 |
Vitis vinifera | chr5 | 13 | CH_vvi_6 | 14 | 14 | 3.05791e-43 |
Vitis vinifera | chr5 | 14 | CH_vvi_6 | 14 | 14 | 3.05791e-43 |
Zea mays | 1 | 13 | CH_zma_130 | 3 | 3 | 0.0000000379398 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |