Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR017761
Description
Laccase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd213CH_bdi_2125390.00000273772
Oryza sativa ssp. japonica113CH_osa_2556710.0000000136739
Oryza sativa ssp. japonica513CH_osa_470340.0000117613
Populus trichocarpaChr0513CH_ptr_564330.0000871554
Populus trichocarpaChr0613CH_ptr_565330.0000871554
Populus trichocarpaChr1513CH_ptr_371450.000000542049
Populus trichocarpaChr1613CH_ptr_3047620.000000086109
Populus trichocarpaChr1913CH_ptr_192550.000000000132419
Setaria italicascaffold_513CH_sit_4735600.0000324182
Sorghum bicolorchr_313CH_sbi_2046490.0000000111646
Zea mays313CH_zma_1575410.000000220317

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V