Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR013057
Description
Amino acid transporter, transmembrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd313CH_bdi_353330.000209569
Carica papayasupercontig_1213CH_cpa_122450.000000905402
Carica papayasupercontig_1913CH_cpa_296330.000109854
Oryza sativa ssp. indicaChr0113CH_osaindica_2286130.000000000699293
Oryza sativa ssp. indicaChr0113CH_osaindica_909340.000639421
Oryza sativa ssp. indicaChr0413CH_osaindica_726330.000160025
Oryza sativa ssp. indicaChr0613CH_osaindica_908340.000639421
Oryza sativa ssp. japonica113CH_osa_404460.00000176408
Oryza sativa ssp. japonica413CH_osa_605330.000100063
Oryza sativa ssp. japonica613CH_osa_761340.000399892
Populus trichocarpaChr0413CH_ptr_689330.000317429
Populus trichocarpaChr0613CH_ptr_454460.0000092197
Populus trichocarpaChr1113CH_ptr_453460.0000092197
Setaria italicascaffold_413CH_sit_641330.00028432
Setaria italicascaffold_513CH_sit_642330.00028432
Setaria italicascaffold_613CH_sit_178550.00000000106007
Setaria italicascaffold_713CH_sit_377450.00000276074
Solanum lycopersicumch0313CH_sly_574330.000160523
Solanum lycopersicumch0713CH_sly_575330.000160523
Sorghum bicolorchr_1013CH_sbi_710340.000927279
Sorghum bicolorchr_713CH_sbi_157550.000000000766772
Sorghum bicolorchr_813CH_sbi_1157140.00000000000805865
Vitis viniferachr113CH_vvi_1857220.00000000282473
Vitis viniferachr1413CH_vvi_430470.0000407152
Vitis viniferachr1913CH_vvi_635330.000464484
Vitis viniferachr1913CH_vvi_324440.00000117038
Vitis viniferachr413CH_vvi_212560.0000000173947
Vitis viniferachr114CH_vvi_86102500.0000287108
Zea mays1013CH_zma_259470.0000136843
Zea mays613CH_zma_34790.0000000000000674007

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V