Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR011600
- Description
- Peptidase C14, caspase domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 13 | CH_ath_101 | 4 | 4 | 0.0000000000797123 |
Brachypodium distachyon | Bd1 | 13 | CH_bdi_41 | 5 | 6 | 0.000000000000359768 |
Oryza sativa ssp. indica | Chr03 | 13 | CH_osaindica_235 | 4 | 8 | 0.00000000123765 |
Oryza sativa ssp. japonica | 3 | 13 | CH_osa_193 | 4 | 8 | 0.000000000667652 |
Oryza sativa ssp. japonica | 5 | 13 | CH_osa_856 | 2 | 2 | 0.00099909 |
Populus trichocarpa | Chr17 | 13 | CH_ptr_245 | 4 | 6 | 0.00000000556193 |
Setaria italica | scaffold_3 | 13 | CH_sit_335 | 3 | 3 | 0.0000010488 |
Setaria italica | scaffold_9 | 13 | CH_sit_105 | 5 | 6 | 0.000000000000359965 |
Solanum lycopersicum | ch01 | 13 | CH_sly_304 | 3 | 3 | 0.000000414776 |
Sorghum bicolor | chr_1 | 13 | CH_sbi_367 | 3 | 4 | 0.0000058022 |
Sorghum bicolor | chr_9 | 13 | CH_sbi_317 | 3 | 3 | 0.00000145091 |
Zea mays | 1 | 13 | CH_zma_181 | 3 | 3 | 0.000000834675 |
Zea mays | 9 | 13 | CH_zma_182 | 3 | 3 | 0.000000834675 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |