Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR005299
Description
SAM dependent carboxyl methyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana113CH_ath_354340.0000488647
Arabidopsis thaliana313CH_ath_353340.0000488647
Arabidopsis thaliana513CH_ath_3314170.0000243077
Carica papayasupercontig_11613CH_cpa_165330.0000115368
Carica papayasupercontig_17013CH_cpa_166330.0000115368
Carica papayasupercontig_613CH_cpa_51590.000000000717804
Musa acuminatachr713CH_mac_58154.83045e-19
Oryza sativa ssp. indicaChr0413CH_osaindica_2875170.0000000110993
Oryza sativa ssp. indicaChr0413CH_osaindica_649350.0000790168
Oryza sativa ssp. indicaChr0613CH_osaindica_1177220.0000000000000595306
Oryza sativa ssp. indicaChr0613CH_osaindica_2416360.00000000156292
Oryza sativa ssp. japonica1113CH_osa_709359.09183e-17
Oryza sativa ssp. japonica413CH_osa_2735150.0000000272119
Oryza sativa ssp. japonica613CH_osa_4454120.00000680257
Oryza sativa ssp. japonica613CH_osa_2606380.0000000158739
Oryza sativa ssp. japonica613CH_osa_2611251.82504e-24
Oryza sativa ssp. japonica614CH_osa_2811251.82504e-24
Oryza sativa ssp. japonica614CH_osa_67101160.0000000000000788397
Populus trichocarpaChr1713CH_ptr_1596150.0000000000101715
Populus trichocarpaChr1913CH_ptr_184570.0000000000781539
Setaria italicascaffold_413CH_sit_464350.0000266805
Setaria italicascaffold_413CH_sit_173440.000000000978315
Setaria italicascaffold_913CH_sit_375330.00000266967
Solanum lycopersicumch0913CH_sly_401330.00000874485
Sorghum bicolorchr_1013CH_sbi_410340.0000231241
Sorghum bicolorchr_313CH_sbi_364330.00000578335
Vitis viniferachr113CH_vvi_108660.000000000000207916
Vitis viniferachr1713CH_vvi_490330.0000838345
Vitis viniferachr1813CH_vvi_252440.000000116656
Vitis viniferachr313CH_vvi_488330.0000838345
Vitis viniferachr413CH_vvi_1813156.29601e-32
Vitis viniferachr413CH_vvi_489330.0000838345
Vitis viniferachr414CH_vvi_1813156.29601e-32
Zea mays413CH_zma_90450.00000000260398
Zea mays513CH_zma_41560.000000000000864403
Zea mays913CH_zma_194330.00000172626

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V