Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR004853
- Description
- Triose-phosphate transporter domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 13 | CH_ath_423 | 3 | 3 | 0.000172758 |
Arabidopsis thaliana | 4 | 13 | CH_ath_68 | 6 | 6 | 0.000000000000757535 |
Brachypodium distachyon | Bd5 | 13 | CH_bdi_340 | 3 | 3 | 0.000137001 |
Carica papaya | supercontig_14 | 13 | CH_cpa_101 | 4 | 4 | 0.000000278029 |
Carica papaya | supercontig_77 | 13 | CH_cpa_128 | 4 | 5 | 0.00000138808 |
Oryza sativa ssp. indica | Chr09 | 13 | CH_osaindica_208 | 5 | 6 | 0.000000000289611 |
Oryza sativa ssp. japonica | 4 | 13 | CH_osa_537 | 3 | 3 | 0.0000351865 |
Setaria italica | scaffold_2 | 13 | CH_sit_691 | 3 | 4 | 0.000472466 |
Setaria italica | scaffold_7 | 13 | CH_sit_692 | 3 | 4 | 0.000472466 |
Setaria italica | scaffold_9 | 13 | CH_sit_280 | 4 | 4 | 0.000000169996 |
Solanum lycopersicum | ch02 | 13 | CH_sly_132 | 6 | 7 | 0.00000000000975951 |
Solanum lycopersicum | ch10 | 13 | CH_sly_637 | 3 | 3 | 0.000236546 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |